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Man Pages


Manual Reference Pages  -  COPYMAT (1)

NAME

copymat - convert ASCII matrices into a database suitable for quick reading

CONTENTS

Synopsis
Description
Options
Author
See Also

SYNOPSIS

copymat [-] [-H] [-P filename] [-W N] [-f X] [-r F]

DESCRIPTION

copymat converts ASCII matrices produced by makemat(1) into a database that can be read into memory quickly.

OPTIONS

A summary of options is included below.
- Print usage message
-H Print help; overrides all other arguments
-P filename
  Database for matrix profiles (default = stdin)
-W N Word size for RPS database (default = 3)
-f X Threshold for extending hits for RPS database (default = 11.0)
-r F Do not create RPS mem map file(s)

AUTHOR

The National Center for Biotechnology Information.

SEE ALSO

impala(1), makemat(1), impala.html
Search for    or go to Top of page |  Section 1 |  Main Index


NCBI COPYMAT (1) 2004-06-25

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