|-clobber||Overwrite an existing file.|
|Dont overwrite an existing file (default).|
|-debug||Dump a lot of extra information (for when things go haywire).|
|-verbose||Print out extra information (more than the default).|
|-quiet||Print out only the requested numbers|
|Specify the maximum size of the internal buffers (in kbytes). Default is 4 MB.|
|Check that all input files have matching sampling in world dimensions (default).|
Ignore any differences in world dimensions sampling for input files .
-floor min A lower bound for ranges of data to include in statistic calculations. -ceil max An upper bound for ranges of data to include in statistic calculations. -range min,max A lower and upper bound for the ranges of data to include in statistics. -mask filename.mnc Name of file to be used for masking data included in statistic calculations.
-all Compute all statistical measures. This is the default. -ssq Print the Sum Squared Difference between two input files
SSQ = Sum( (A-B)^2 )
-rmse Print the Root Mean Squared Error between two input files
RMSE = sqrt( 1/n * Sum((A-B)^2))
-xcorr Print the Cross Correlation between two input files
XCORR = Sum((A*B)^2) / (sqrt(Sum(A^2)) * sqrt(Sum(B^2))
-zscore Print the z-score difference between two input files
ZSCORE = Sum( |((A - mean(A)) / stdev(A)) -
((B - mean(B)) / stdev(B))| ) / n
-help Print summary of command-line options and exit. -version Print the programs version number and exit.
Copyright © 2010 by Andrew Janke
|MINCCMP (1)||$Date: 2010-03-02 12:12:20 $|