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Man Pages


Manual Reference Pages  -  BIO::LIVESEQ::RANGE (3)

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NAME

Bio::LiveSeq::Range - Range abstract class for LiveSeq

CONTENTS

SYNOPSIS



  # documentation needed



DESCRIPTION

This is used as parent for exon and intron classes.

AUTHOR - Joseph A.L. Insana

Email: Insana@ebi.ac.uk, jinsana@gmx.net

APPENDIX

The rest of the documentation details each of the object methods. Internal methods are usually preceded with a _

    new



  Title   : new
  Usage   : $range1 = Bio::LiveSeq::Range->new(-seq => $obj_ref,
                                               -start => $beginlabel,
                                               -end => $endlabel, -strand => 1);

  Function: generates a new Bio::LiveSeq::Range
  Returns : reference to a new object of class Range
  Errorcode -1
  Args    : two labels, an obj_ref and an integer
            strand 1=forward strand, strand -1=reverse strand
            if strand not specified, it defaults to 1
            the -seq argument must point to the underlying DNA LiveSeq object



    valid



  Title   : valid
  Usage   : $boolean = $obj->valid($label)
  Function: tests if a label exists AND is part of the object
  Returns : boolean
  Args    : label



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perl v5.20.3 BIO::LIVESEQ::RANGE (3) 2016-04-05

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