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Manual Reference Pages  -  BIO::PHYLO::MATRICES::DATATYPE::RESTRICTION (3)

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NAME

Bio::Phylo::Matrices::Datatype::Restriction - Validator subclass, no serviceable parts inside

CONTENTS

DESCRIPTION

The Bio::Phylo::Matrices::Datatype::* classes are used to validate data contained by Bio::Phylo::Matrices::Matrix and Bio::Phylo::Matrices::Datum objects.

    METHODS

get_ids_for_special_symbols() Gets state-to-id mapping for missing and gap symbols



 Type    : Accessor
 Title   : get_ids_for_special_symbols
 Usage   : my %ids = %{ $obj->get_ids_for_special_symbols };
 Function: Returns state-to-id mapping
 Returns : An empty hash reference
 Args    : None
 Notes   : This method is here as an override
           because restriction site data has
           no missing or gap symbols, just
           presence/absence



SEE ALSO

There is a mailing list at <https://groups.google.com/forum/#!forum/bio-phylo> for any user or developer questions and discussions.
Bio::Phylo::Matrices::Datatype This class subclasses Bio::Phylo::Matrices::Datatype.
Bio::Phylo::Manual Also see the manual: Bio::Phylo::Manual and <http://rutgervos.blogspot.com>.

CITATION

If you use Bio::Phylo in published research, please cite it:

<B>Rutger A VosB>, <B>Jason CaravasB>, <B>Klaas HartmannB>, <B>Mark A JensenB> and <B>Chase MillerB>, 2011. Bio::Phylo - phyloinformatic analysis using Perl. BMC Bioinformatics <B>12B>:63. <http://dx.doi.org/10.1186/1471-2105-12-63>

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perl v5.20.3 BIO::PHYLO::MATRICES::DATATYPE::RESTRICTION (3) 2014-02-08

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