Manual Reference Pages - BIO::SEQIO::ZTR (3)
Bio::SeqIO::ztr - ztr trace sequence input/output stream
Do not use this module directly. Use it via the Bio::SeqIO class.
This object can transform Bio::Seq objects to and from ztr trace
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AUTHORS - Aaron Mackey
The rest of the documentation details each of the object
methods. Internal methods are usually preceded with a _
Title : next_seq
Usage : $seq = $stream->next_seq()
Function: returns the next sequence in the stream
Returns : Bio::Seq::Quality object
Args : NONE
Title : write_seq
Usage : $stream->write_seq(@seq)
Function: writes the $seq object into the stream
Returns : 1 for success and 0 for error
Args : Bio::Seq object
Title : compression
Usage : $stream->compression(3);
Function: determines the level of ZTR compression
Returns : the current (or newly set) value.
Args : 1, 2 or 3 - any other (defined) value will cause the compression
to be reset to the default of 2.
|perl v5.20.3 ||BIO::SEQIO::ZTR (3) ||2016-04-05 |
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