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Parser module for Signalp.
Based on the EnsEMBL module Bio::EnsEMBL::Pipeline::Runnable::Protein::Signalp
originally written by Marc Sohrmann (ms2 a sanger.ac.uk) Written in BioPipe by
Balamurugan Kumarasamy (savikalpa a fugu-sg.org) Cared for by the Fugu
Informatics team (email@example.com)
You may distribute this module under the same terms as perl itself
Compared to the original SignalP, this method allow the user to filter results
out based on maxC maxY maxS meanS and D factor cutoff for the Neural Network (NN)
method only. The HMM method does not give any filters with YES or NO as result.
The user must be aware that the filters can only by applied on NN method.
Also, to ensure the compatibility with original Signalp parsing module, the user
must know that by default, if filters are empty, max Y and mean S filters are
automatically used to filter results.
If the used gives a list, then the parser will only report protein having YES
for each factor.
This module supports parsing for full, summary and short output form signalp.
Actually, full and summary are equivalent in terms of filtering results.