Manual Reference Pages - ACE::GRAPHICS::GLYPH::TRANSCRIPT (3)
Ace::Graphics::Glyph::transcript - The "gene" glyph
See L<Ace::Graphics::Panel> and L<Ace::Graphics::Glyph>.
This glyph draws a series of filled rectangles connected by up-angled
connectors or hats. The rectangles indicate exons; the hats are
introns. The direction of transcription is indicated by a small arrow
at the end of the glyph, rightward for the + strand.
The feature must respond to the exons() and optionally introns()
methods, or it will default to the generic display. Implied introns
(not returned by the introns() method) are drawn in a contrasting
color to explicit introns.
In addition to the common options, the following glyph-specific
option is recognized:
Option Description Default
------ ----------- -------
-implied_intron_color The color to use for gaps gray
not returned by the introns()
-draw_arrow Whether to draw arrowhead true
indicating direction of
Please report them.
Ace::Sequence, Ace::Sequence::Feature, Ace::Graphics::Panel,
Lincoln Stein <firstname.lastname@example.org>.
Copyright (c) 2001 Cold Spring Harbor Laboratory
This library is free software; you can redistribute it and/or modify
it under the same terms as Perl itself. See DISCLAIMER.txt for
disclaimers of warranty.
|perl v5.20.3 ||ACE::GRAPHICS::GLYPH::TRANSCRIPT (3) ||2001-05-22 |
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