GSP
Quick Navigator

Search Site

Unix VPS
A - Starter
B - Basic
C - Preferred
D - Commercial
MPS - Dedicated
Previous VPSs
* Sign Up! *

Support
Contact Us
Online Help
Handbooks
Domain Status
Man Pages

FAQ
Virtual Servers
Pricing
Billing
Technical

Network
Facilities
Connectivity
Topology Map

Miscellaneous
Server Agreement
Year 2038
Credits
 

USA Flag

 

 

Man Pages


Manual Reference Pages  -  BIO::DB::SEQVERSION (3)

.ds Aq ’

NAME

Bio::DB::SeqVersion - front end to querying databases for identifier versions

CONTENTS

SYNOPSIS



  use Bio::DB::SeqVersion;

  my $query = Bio::DB::SeqVersion->new(-type => gi);

  my @all_gis = $query->get_all(2);

  my $live_gi = $query->get_recent(2);



DESCRIPTION

The default type is ’gi’.

FEEDBACK

    Mailing Lists

User feedback is an integral part of the evolution of this and other Bioperl modules. Send your comments and suggestions preferably to the Bioperl mailing list. Your participation is much appreciated.



  bioperl-l@bioperl.org                  - General discussion
  http://bioperl.org/wiki/Mailing_lists  - About the mailing lists



    Support

Please direct usage questions or support issues to the mailing list:

bioperl-l@bioperl.org

rather than to the module maintainer directly. Many experienced and reponsive experts will be able look at the problem and quickly address it. Please include a thorough description of the problem with code and data examples if at all possible.

    Reporting Bugs

Report bugs to the Bioperl bug tracking system to help us keep track of the bugs and their resolution. Bug reports can be submitted via the web:



  https://github.com/bioperl/bioperl-live/issues



AUTHOR - Brian Osborne

Email bosborne at alum.mit.edu

CONTRIBUTORS

Torsten Seemann - torsten.seemann AT infotech.monash.edu.au

APPENDIX

The rest of the documentation details each of the object methods. Internal methods are usually preceded with a _

new()



 Usage   : my $obj = Bio::DB::SeqVersion->new();
 Function: Create a Bio::DB::SeqVersion object
 Returns : An instance of Bio::DB::SeqVersion
 Args    : -type      Identifier namespace, default is gi



get_recent()



 Usage   :
 Function:
 Example :
 Returns :
 Args    :



get_all()



 Usage   :
 Function:
 Example :
 Returns :
 Args    :



    _load_seqversion_module



 Title   : _load_seqversion_module
 Usage   : Used internally
 Function: Loads up a module at run time on demand
 Example :
 Returns :
 Args    : Name of identifier type



    default_id_type



 Title   : default_id_type
 Usage   : my $type = $self->default_id_type
 Function: Returns default identifier type for this module
 Returns : string
 Args    : none



Search for    or go to Top of page |  Section 3 |  Main Index


perl v5.20.3 BIO::DB::SEQVERSION (3) 2016-04-05

Powered by GSP Visit the GSP FreeBSD Man Page Interface.
Output converted with manServer 1.07.