GSP
Quick Navigator

Search Site

Unix VPS
A - Starter
B - Basic
C - Preferred
D - Commercial
MPS - Dedicated
Previous VPSs
* Sign Up! *

Support
Contact Us
Online Help
Handbooks
Domain Status
Man Pages

FAQ
Virtual Servers
Pricing
Billing
Technical

Network
Facilities
Connectivity
Topology Map

Miscellaneous
Server Agreement
Year 2038
Credits
 

USA Flag

 

 

Man Pages
Bio::LiveSeq::Exon(3) User Contributed Perl Documentation Bio::LiveSeq::Exon(3)
 

Bio::LiveSeq::Exon - Range abstract class for LiveSeq

  # documentation needed

Class for EXON objects. They consist of a beginlabel, an endlabel (both referring to a LiveSeq DNA object) and a strand. The strand could be 1 (forward strand, default), -1 (reverse strand).

Email: Insana@ebi.ac.uk, jinsana@gmx.net

The rest of the documentation details each of the object methods. Internal methods are usually preceded with a _

  Title   : new
  Usage   : $exon1 = Bio::LiveSeq::Exon-> new(-seq => $objref,
                                              -start => $startlabel,
                                              -end => $endlabel, -strand => 1);
  Function: generates a new Bio::LiveSeq::Exon
  Returns : reference to a new object of class Exon
  Errorcode -1
  Args    : two labels and an integer

  Title   : get_Transcript
  Usage   : $transcript = $obj->get_Transcript()
  Function: retrieves the reference to the object of class Transcript (if any)
            attached to a LiveSeq object
  Returns : object reference
  Args    : none
  Note    : only Exons that compose a Transcript (i.e. those created out of
            a CDS Entry-Feature) will have an attached Transcript
2019-01-01 perl v5.28.1

Search for    or go to Top of page |  Section 3 |  Main Index

Powered by GSP Visit the GSP FreeBSD Man Page Interface.
Output converted with ManDoc.