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Bio::Phylo::Parsers::Table(3) User Contributed Perl Documentation Bio::Phylo::Parsers::Table(3)

Bio::Phylo::Parsers::Table - Parser used by Bio::Phylo::IO, no serviceable parts inside

This module is used to import data and taxa from plain text files or strings. The following additional argument must be used in the call to Bio::Phylo::IO: 

 -type => (one of [DNA|RNA|STANDARD|PROTEIN|NUCLEOTIDE|CONTINUOUS])

In addition, these arguments may be used to indicate line separators (default is "\n") and field separators (default is "\t"):

 -fieldsep => '\t',
 -linesep  => '\n'

There is a mailing list at <https://groups.google.com/forum/#!forum/bio-phylo> for any user or developer questions and discussions.
Bio::Phylo::IO
The table parser is called by the Bio::Phylo::IO object. Look there to learn how to parse tab- (or otherwise) delimited matrices.
Bio::Phylo::Manual
Also see the manual: Bio::Phylo::Manual and <http://rutgervos.blogspot.com>

If you use Bio::Phylo in published research, please cite it:

Rutger A Vos, Jason Caravas, Klaas Hartmann, Mark A Jensen and Chase Miller, 2011. Bio::Phylo - phyloinformatic analysis using Perl. BMC Bioinformatics 12:63. <http://dx.doi.org/10.1186/1471-2105-12-63>

2017-10-30 perl v5.32.1
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