Manual Reference Pages - ACE::GRAPHICS::GLYPH::SEGMENTS (3)
Ace::Graphics::Glyph::segments - The "discontinuous segments" glyph
See L<Ace::Graphics::Panel> and L<Ace::Graphics::Glyph>.
This glyph draws a sequence feature that consists of multiple
discontinuous segments, such as the exons on a transcript or a gapped
alignment. The representation is a series of filled rectangles
connected by line segments.
The features passed to it must either respond to the
Bio::SequenceFeatureI-style subSeqFeatures() method, or the
AcePerl/Das-style segments() or merged_segments() methods.
In addition to the common options, this glyph recognizes the
b<-stranded> argument. If b<-stranded> is true and the feature is an
alignment (has the target() method) then the glyph will draw little
arrows in the segment boxes to indicate the direction of the
Please report them.
Ace::Sequence, Ace::Sequence::Feature, Ace::Graphics::Panel,
Lincoln Stein <email@example.com>.
Copyright (c) 2001 Cold Spring Harbor Laboratory
This library is free software; you can redistribute it and/or modify
it under the same terms as Perl itself. See DISCLAIMER.txt for
disclaimers of warranty.
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