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Manual Reference Pages  -  BIO::GRAPHICS::GLYPH::ANCHORED_ARROW (3)

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NAME

Bio::Graphics::Glyph::anchored_arrow - The "anchored_arrow" glyph

CONTENTS

SYNOPSIS



  See L<Bio::Graphics::Panel> and L<Bio::Graphics::Glyph>.



DESCRIPTION

This glyph draws an arrowhead which is anchored at one or both ends (has a vertical base) or has one or more arrowheads. The arrowheads indicate that the feature does not end at the edge of the picture, but continues. For example:



    |-----------------------------|          both ends in picture
 <----------------------|                    left end off picture
         |---------------------------->      right end off picture
 <------------------------------------>      both ends off picture



You can also set the glyph so that the end is just truncated at the end of the picture.



         |-----------------------------



    OPTIONS

The following options are standard among all Glyphs. See Bio::Graphics::Glyph for a full explanation.



  Option      Description                      Default
  ------      -----------                      -------

  -fgcolor      Foreground color               black

  -outlinecolor Synonym for -fgcolor

  -bgcolor      Background color               turquoise

  -fillcolor    Synonym for -bgcolor

  -linewidth    Line width                     1

  -height       Height of glyph                10

  -font         Glyph font                     gdSmallFont

  -connector    Connector type                 0 (false)

  -connector_color
                Connector color                black

  -label        Whether to draw a label        0 (false)

  -description  Whether to draw a description  0 (false)

  -hilite       Highlight color                undef (no color)



In addition to the standard options, this glyph recognizes the following:



  Option         Description                Default

  -tick          draw a scale               0 (false)

  -relative_coords
                 use relative coordinates   0 (false)
                 for scale

  -relative_coords_offset
                 set the relative offset    1
                 for scale

  -no_arrows     dont draw an arrow when   0 (false)
                 glyph is partly offscreen



The argument for <B>-tickB> is an integer between 0 and 2 and has the same interpretation as the <B>-tickB> option in Bio::Graphics::Glyph::arrow.

If <B>-rel_coordsB> is set to a true value, then the scale drawn on the glyph will be in relative (1-based) coordinates relative to the beginning of the glyph.

BUGS

Please report them.

SEE ALSO

Bio::Graphics::Panel, Bio::Graphics::Glyph, Bio::Graphics::Glyph::arrow, Bio::Graphics::Glyph::cds, Bio::Graphics::Glyph::crossbox, Bio::Graphics::Glyph::diamond, Bio::Graphics::Glyph::dna, Bio::Graphics::Glyph::dot, Bio::Graphics::Glyph::ellipse, Bio::Graphics::Glyph::extending_arrow, Bio::Graphics::Glyph::generic, Bio::Graphics::Glyph::graded_segments, Bio::Graphics::Glyph::heterogeneous_segments, Bio::Graphics::Glyph::line, Bio::Graphics::Glyph::pinsertion, Bio::Graphics::Glyph::primers, Bio::Graphics::Glyph::rndrect, Bio::Graphics::Glyph::segments, Bio::Graphics::Glyph::ruler_arrow, Bio::Graphics::Glyph::toomany, Bio::Graphics::Glyph::transcript, Bio::Graphics::Glyph::transcript2, Bio::Graphics::Glyph::translation, Bio::Graphics::Glyph::triangle, Bio::DB::GFF, Bio::SeqI, Bio::SeqFeatureI, Bio::Das, GD

AUTHOR

Allen Day <day@cshl.org>.

Copyright (c) 2001 Cold Spring Harbor Laboratory

This library is free software; you can redistribute it and/or modify it under the same terms as Perl itself. See DISCLAIMER.txt for disclaimers of warranty.

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perl v5.20.3 BIO::GRAPHICS::GLYPH::ANCHORED_ARROW (3) 2016-04-05

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