GSP
Quick Navigator

Search Site

Unix VPS
A - Starter
B - Basic
C - Preferred
D - Commercial
MPS - Dedicated
Previous VPSs
* Sign Up! *

Support
Contact Us
Online Help
Handbooks
Domain Status
Man Pages

FAQ
Virtual Servers
Pricing
Billing
Technical

Network
Facilities
Connectivity
Topology Map

Miscellaneous
Server Agreement
Year 2038
Credits
 

USA Flag

 

 

Man Pages


Manual Reference Pages  -  BIO::MAGETAB::PROTOCOL (3)

.ds Aq ’

NAME

Bio::MAGETAB::Protocol - MAGE-TAB protocol class

CONTENTS

SYNOPSIS



 use Bio::MAGETAB::Protocol;



DESCRIPTION

This class is used to describe experimental protocols in MAGE-TAB. It can either contain all the information about a protocol itself, or it can link to a protocol entry in a suitable database via its superclass. See the DatabaseEntry class for superclass methods.

ATTRIBUTES

name (required) The name of the protocol (data type: String).
text (optional) A free-text description of the protocol, giving all the steps in the procedure (data type: String).
software (optional) The software used in the protocol. Multiple softwares must be concatenated into a single value (data type: String).
hardware (optional) The hardware used in the protocol. Multiple hardwares must be concatenated into a single value (data type: String).
protocolType (optional) The type of the protocol (’nucleic_acid_extraction’,’labeling’ etc.; data type: Bio::MAGETAB::ControlledTerm).
contact (optional) A contact for more information on the protocol. Multiple contacts must be concatenated into a single value (data type: String).

METHODS

Each attribute has accessor (get_*) and mutator (set_*) methods, and also predicate (has_*) and clearer (clear_*) methods where the attribute is optional. Where an attribute represents a one-to-many relationship the mutator accepts an arrayref and the accessor returns an array.

SEE ALSO

Bio::MAGETAB::DatabaseEntry

AUTHOR

Tim F. Rayner <tfrayner@gmail.com>

LICENSE

This library is released under version 2 of the GNU General Public License (GPL).
Search for    or go to Top of page |  Section 3 |  Main Index


perl v5.20.3 BIO::MAGETAB::PROTOCOL (3) 2013-01-13

Powered by GSP Visit the GSP FreeBSD Man Page Interface.
Output converted with manServer 1.07.