Manual Reference Pages - BIO::MAGETAB::SDRF (3)
Bio::MAGETAB::SDRF - MAGE-TAB SDRF class
This class is used to describe the SDRFs used in a given
investigation. See the BaseClass class for superclass methods.
The URI specifying the location of the SDRF (data type: Uri).
A list of SDRFRow objects which describe the row structure of the
SDRF. In so doing, these SDRFRows link the SDRF nodes to their
respective investigation, factor value and channel (data type:
Each attribute has accessor (get_*) and mutator (set_*) methods, and
also predicate (has_*) and clearer (clear_*) methods where the
attribute is optional. Where an attribute represents a one-to-many
relationship the mutator accepts an arrayref and the accessor returns
Passed an arrayref of Node objects, this method automatically sorts
them into SDRFRow objects, which it then stores. Currently this method
is not intelligent enough to sort Nodes into pre-existing SDRFRows, so
it is recommended to use this method only once you have created all
your Nodes (this may be fixed in a subsequent release).
Tim F. Rayner <firstname.lastname@example.org>
This library is released under version 2 of the GNU General Public
|perl v5.20.3 ||BIO::MAGETAB::SDRF (3) ||2013-01-13 |
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