NAME

fasda - Fast, simple differential analysis

SYNOPSIS

fasda --version
fasda abundance features.gff3 alignment-file [alignment-file ...]
fasda normalize [--mrn] [--output file.tsv] abundance1.tsv abundance2.tsv ...
fasda fold-change [--output file.txt] [--near-exact] \
	   normalized-counts1.tsv  normalized-counts2.tsv \
	   [normalized-counts3.tsv ...]
fasda filter [--min-mnc N] [--max-sd N] [--min-fc N] \


       [--max-p-val N] fc-file.txt
fasda heatmap [--debug] features-file cond1-file cond2-file

DESCRIPTION

FASDA is a set of fast, simple differential analysis tools written in C for maximum speed, portability, and easy command-line use.

SEE ALSO

fasda-abundance(1), fasda-normalize(1), fasda-fold-change(1), fasda-filter(1), fasda-heatmap(1)

BUGS

Please report bugs to the author and send patches in unified diff format. (man diff for more information)

AUTHOR

J. Bacon