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NAMEgmx-densorder - Calculate surface fluctuations SYNOPSISgmx densorder [-s [<.tpr>]] [-f [<.xtc/.trr/...>]] [-n [<.ndx>]] DESCRIPTIONgmx densorder reduces a two-phase density distribution along an axis, computed over a MD trajectory, to 2D surfaces fluctuating in time, by a fit to a functional profile for interfacial densities. A time-averaged spatial representation of the interfaces can be output with the option -tavg. OPTIONSOptions to specify input files:
Options to specify output files:
Other options:
SEE ALSOgmx(1) More information about GROMACS is available at <http://www.gromacs.org/>. COPYRIGHT2025, GROMACS development team
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