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VCFGLBOUND(1) vcfglbound (VCF transformation) VCFGLBOUND(1)

vcfglbound

vcfglbound options

Adjust GLs so that the maximum GL is 0 by dividing all GLs for each sample by the max.


Then cap (bound) at N (e.g. -10).options:
    -b, --bound N          Bound GLs to this limit.
    -x, --exclude-broken   If GLs are > 0, remove site.
Type: transformation

    

0
Success
not 0
Failure

vcflib(1)

Copyright 2011-2022 (C) Erik Garrison and vcflib contributors. MIT licensed.

Erik Garrison and vcflib contributors.
vcfglbound (vcflib)

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