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| VCFREMOVEABERRANTGENOTYPES(1) | vcfremoveaberrantgenotypes (VCF transformation) | VCFREMOVEABERRANTGENOTYPES(1) |
NAME
vcfremoveaberrantgenotypes
SYNOPSIS
vcfremoveaberrantgenotypes
DESCRIPTION
strips samples which are homozygous but have observations implying heterozygosity. Remove samples for which the reported genotype (GT) and observation counts disagree (AO, RO).
OPTIONS
-
Type: transformation
EXIT VALUES
- 0
- Success
- not 0
- Failure
SEE ALSO
vcflib(1)
OTHER
LICENSE
Copyright 2011-2025 (C) Erik Garrison and vcflib contributors. MIT licensed. Copyright 2020-2025 (C) Pjotr Prins.
AUTHORS
Erik Garrison and vcflib contributors.
| vcfremoveaberrantgenotypes (vcflib) |
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