NAME

vcfuniq

SYNOPSIS

vcfuniq

DESCRIPTION

List unique genotypes. Similar to GNU uniq, but aimed at VCF records. vcfuniq removes records which have the same position, ref, and alt as the previous record on a sorted VCF file. Note that it does not adjust/combine genotypes in the output, but simply takes the first record. See also vcfcreatemulti for combining records.

OPTIONS

Type: filter


      
    

EXIT VALUES

0

Success

not 0

Failure

SEE ALSO

vcflib(1)

OTHER

LICENSE

Copyright 2011-2025 (C) Erik Garrison and vcflib contributors. MIT licensed. Copyright 2020-2025 (C) Pjotr Prins.

AUTHORS

Erik Garrison and vcflib contributors.