SYNOPSIS

blt ensemblid2gene file.gff3 ids.txt > ids-and-gene-names.tsv

DESCRIPTION

blt ensemblid2gene reads a list of Ensembl IDs, one per line, and outputs them along with their associated gene name, in TSV (tab-separated-values) format. IDs should be genes, transcripts, or other elements containing ID=<ensembl-id> and Name=<gene> in the attributes.

EXAMPLES

blt ensemblid2gene file.gff3 ids.txt > ids-and-gene-names.tsv

SEE ALSO

blt(1)

AUTHOR

J. Bacon