GSP
Quick Navigator
Search Site

Unix VPS
A - Starter
B - Basic
C - Preferred
D - Commercial
MPS - Dedicated
Previous VPSs
* Sign Up! *

Support
Contact Us
Online Help
Handbooks
Domain Status
Man Pages

FAQ
Virtual Servers
Pricing
Billing
Technical

Network
Facilities
Connectivity
Topology Map

Miscellaneous
Server Agreement
Year 2038
Credits
 

USA Flag

 

 

Man Pages
BIOLIBC(3) FreeBSD Library Functions Manual BIOLIBC(3)

BIOLIBC - Library of high-performance low-level functions for bioinformatics programming 

#include <biolibc/bed.h>
#include <biolibc/biolibc.h>
#include <biolibc/biostring.h>
#include <biolibc/gff.h>
#include <biolibc/overlap.h>
#include <biolibc/pos-list.h>
#include <biolibc/sam.h>
#include <biolibc/sam-buff.h>
#include <biolibc/vcf.h>
cc program.c -lbiolibc -lxtend

Biolibc is a library of fast, memory-efficient, low-level functions for processing biological data.

Like libc, it consists of numerous disparate, general-purpose functions which could be used by a wide variety of applications.

These include functions for streaming common file formats such as SAM and VCF, string functions specific to bioinformatics, etc.

Documentation on individual functions should be available soon.

vcf-split, ad2vcf, vcf2hap, peak-classifier

Please report bugs to the author and send patches in unified diff format. (man diff for more information) 

J. Bacon
Search for    or go to Top of page |  Section 3 |  Main Index

Powered by GSP Visit the GSP FreeBSD Man Page Interface.
Output converted with ManDoc.