GSP
Quick Navigator

Search Site

Unix VPS
A - Starter
B - Basic
C - Preferred
D - Commercial
MPS - Dedicated
Previous VPSs
* Sign Up! *

Support
Contact Us
Online Help
Handbooks
Domain Status
Man Pages

FAQ
Virtual Servers
Pricing
Billing
Technical

Network
Facilities
Connectivity
Topology Map

Miscellaneous
Server Agreement
Year 2038
Credits
 

USA Flag

 

 

Man Pages
Bio::MAGETAB::Util::Writer::GraphViz(3) User Contributed Perl Documentation Bio::MAGETAB::Util::Writer::GraphViz(3)
 

Bio::MAGETAB::Util::Writer::GraphViz - Visualization of MAGE-TAB objects.

 use Bio::MAGETAB::Util::Writer::GraphViz;
 my $graphviz = Bio::MAGETAB::Util::Writer::GraphViz->new({
    sdrfs => \@sdrfs,
    font  => 'luxisr',
 });
 
 my $image = $graphviz->draw();
 
 print $fh $image->as_png();

This is a simple visualization class for MAGE-TAB objects. Given a list of Bio::MAGETAB::SDRF objects and a filehandle, it will return a GraphViz object which can then be written to file in a number of formats.

sdrfs
A list of Bio::MAGETAB::SDRFs object to visualize. This is a required attribute. See the SDRF class for more information on this class.
font
The font used for object labels in the output.
graphviz
A GraphViz object. If this is not supplied, a default object will be created; this attribute is provided so that you have a means of accessing the underlying graph generation object.

draw
Creates a GraphViz graph in memory ready for output.

Bio::MAGETAB::SDRF, GraphViz

Tim F. Rayner <tfrayner@gmail.com>

This library is released under version 2 of the GNU General Public License (GPL).
2013-01-13 perl v5.28.1

Search for    or go to Top of page |  Section 3 |  Main Index

Powered by GSP Visit the GSP FreeBSD Man Page Interface.
Output converted with ManDoc.