Bio::Search::Result::WABAResult - Result object for WABA alignment output
# use this object exactly as you would a GenericResult # the only extra method
is query_database which is the # name of the file where the query sequence
This object is for WABA result output, there is little difference between this
object and a GenericResult save the addition of one method query_database.
Expect many of the fields for GenericResult to be empty however as WABA was
not intended to provide a lot of extra information other than the alignment.
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The rest of the documentation details each of the object methods. Internal
methods are usually preceded with a _
Title : new
Usage : my $obj = Bio::Search::Result::WABAResult->new();
Function: Builds a new Bio::Search::Result::WABAResult object
Returns : Bio::Search::Result::WABAResult
Args : -query_database => "name of the database where the query came from"
Title : query_database
Usage : $obj->query_database($newval)
Function: Data field for the database filename where the
query sequence came from
Returns : value of query_database
Args : newvalue (optional)
See the Bio::Search::Result::GenericResult for complete documentation of the
rest of the methods that are available for this module.