NAME

bl_fastq_write() - Write a FASTQ record

LIBRARY

#include <biolibc/fastq.h>
-lbiolibc -lxtend

SYNOPSIS

int     bl_fastq_write(bl_fastq_t *record, FILE *fastq_stream,
size_t max_line_len)

ARGUMENTS

fastq_stream    FILE stream to which data are written
record          Pointer to a bl_fastq_t structure to be written
max_line_len    Maximum length of a sequence line in output

DESCRIPTION

Write a FASTQ record to the specified FILE stream, writing at most max_line_len sequence characters per line. The special value BL_FASTQ_LINE_UNLIMITED indicates no line length limit.

RETURN VALUES

BL_WRITE_OK upon success, BL_WRITE_FAILURE if a write error occurs.

EXAMPLES

bl_fastq_t  rec = BL_FASTQ_INIT;
while ( bl_fastq_read(stdin, &rec) != BL_READ_EOF )


    bl_fastq_write(stdout, &rec, BL_FASTQ_LINE_UNLIMITED);
bl_fastq_free(&rec);