NAME

bl_sam_copy_header() - Copy SAM header to another stream

LIBRARY

#include <biolibc/sam.h>
-lbiolibc -lxtend

SYNOPSIS

int     bl_sam_copy_header(FILE *header_stream, FILE *sam_stream)

ARGUMENTS

header_stream   Open FILE stream of SAM header
sam_stream      FILE stream to which header is copied

DESCRIPTION

Copy SAM header from one FILE stream to another. This is meant to be used in conjunction with bl_sam_skip_header(), which stores the header in a temporary file.

RETURN VALUES

BL_WRITE_OK upon success, BL_WRITE_FAILURE or BL_READ_* on failure

SEE ALSO

bl_sam_skip_header(3)