NAME

bl_vcf_call_downstream_of_alignment() - Return true if VCF call is downstream of alignment

LIBRARY

#include <biolibc/vcf.h>
-lbiolibc -lxtend

SYNOPSIS

bool    bl_vcf_call_downstream_of_alignment(bl_vcf_t *vcf_call,
bl_sam_t *alignment)

ARGUMENTS

vcf_call    Pointer to bl_vcf_t structure containing VCF call
sam_alignment   Pointer to bl_sam_t structure containing alignment

DESCRIPTION

Determine if a VCF call is downstream of a SAM alignment. For the purpose of this function, this could mean on the same chrom and higher position, or on a later chrom.

RETURN VALUES

true if the call is downstream of the alignment false otherwise

SEE ALSO

bl_vcf_call_in_alignment(3)